Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903438.1_cds_XP_016453507.1_47626
CDS Infomation

[gene=LOC107777863] [db_xref=GeneID:107777863] [protein=cyclic nucleotide-gated ion channel 2-like] [protein_id=XP_016453507.1] [location=complement(join(88475..88960,89258..89344,89438..89674,89758..89869,90270..90586,90757..90972,93492..94128,94531..94568))] [gbkey=CDS]
Sequence

ATGTCTTCTCGCCAAGACCTACGCTTCTTCCTCTCAAGGTGGTTCGGCATATTCCGACGA
AGATCAGTTCAACCTGACAACAGCGACGACAACGATGATGACAGCAACCCAATCTCAAAC
TCCATTGAATGTTATGCATGCACTCAAGTTGGCGTCCCAGTTTTCCACTCCACCAGTTGC
GACGGAGCTCACCAACCGGAGTGGGAAGCTTCAGCCGGTTCCTCGCTAGTTCCGATTCAG
AACCGGACTAATAATTCAAGAACCGGAAAATCCCGGTCCAGTCGCAACCGGCATCAGTCG
GGTCCATTCGGACGTGTGTTAGACCCTCGAAGCAAGCGCGTGCAGAGATGGAACCGAATC
ATTTTGTTGGCACGTGGCATGGCCTTAGCCGTTGATCCTCTCTTCTTTTACGCCTTATCC
ATCGGCCGTGGTGGATCGCCGTGCTTGTACATGGACGGCGGACTTGCGGCTATCGTCACG
GTGATACGGACTTGCCTCGACGCCGTACACCTCCTCCACTTGTGGCTGCAGTTTCGGTTG
GCGTACGTGTCGAGAGAGTCGCTAGTTGTTGGGTGTGGGAAACTCGTGTGGGACGCGCGT
GCGATTGCTGCTCACTATGTTCGGTCCGTTAAAGGATTCTGGTTCGATGCTTTTGTCGTC
CTACCTGTTCCGCAGGTTGTATTTTGGCTGGTGGTTCCAAAACTAATCAGAGAAGAGCAG
ATAAAGCTTATAATGACGATTCTTCTACTAATGTTCTTGTTCCAGTTCCTCCCCAAAGTA
TATCACAGCATAAGCTTAATGAGAAGGATGCAAAAGGTTACTGGATATATTTTCGGTACC
ATCTGGTGGGGATTTGGCCTTAATCTCATTGCTTATTTTATTGCTTCTCATGTTGCTGGG
GGTTGCTGGTATGTACTTTCTATACAAAGAGTAGCTTCATGTCTAAGGCAGCAGTGTGAA
CAGAAAGCTTCTTGTAATCTGTCTTTGTCATGCTCAGAGGAGGTTTGTTATCAGTTTCTA
TTGCCAACAGGCACTGTGGGAAATCCATGTGCTGGGAACTCAACAACAGTAATGAGGAAG
CCACTGTGTTTAGATGTCAATGGACCATTCCCATATGGGATATACAAATGGGCTCTACCT
GTTGTTTCTAGTAGGTCTGTCACTGTGAAGATTCTTTATCCCATCTTTTGGGGATTGATG
ACCCTTAGTACATTTGGCAATGACTTAGAACCGACGAGTCACTGGCTAGAAGTTATCTTC
AGTATATGCCTTGTGCTTAGTGGATTGATGCTCTTCACTCTGTTGATAGGGAATATCCAG
GTGTTTTTACACGCGGTCATGGCAAAGAAGCGAAAAATGCAATTGAGGTGCAGGGATATG
GAATGGTGGATGAAGAGGAGACAGTTGCCATCACAATTGAGACAAAGAGTTCGCCACTTT
GAACACCAGAGATGGGCTATGATGGGTGGAGAAGATGAGATGGAACTTGTAAAAGACTTG
CCAGAAGGACTTCGAAGGGATATCAAACGCTTTCTTTGCCTTGATCTTATTAAAAAGGTT
CCTCTGTTCCATAGTTTGGATGATCTGATTCTAGACAACATCTGTGATCGCGTTAAGCCA
TTGGTCTTCTCCAAAGATGAGAAGATCATTAGAGAAGGAGATCCCGTGCACCGGGTGGTG
TTCATTGTTCGTGGGCGAGTAAAAAGTAGCCAAAACCTCAGTAAAGGGATGGTCGCGACG
AGCATACTTGAGCCTGGAGGCTTCTTTGGAGATGAGCTTCTTTCCTGGTGCTTACGTCGT
CCCTTCATTGATAGACTTCCAGCTTCTTCAGCAACCTTCACTTGCATAGAATCCACAGAA
GCATTTGGCTTAGATGCAAACCATCTACGCTTTATCACAGATCACTTCAGATACAAATTT
GCAAACGAGAGGCTTAAGCGAACAGCAAGGTATTATTCATCCAATTGGAGAACGTGGGCT
GCTGTGAATATACAGTTAGCTTGGCGTCGTTACATGGTGAGGACAAGCCGTCCTGTGAAT
CAGGTAACGGAGAATGGGGATAACGATCATCGCCTTCGAAAGTATGCTGCAATGTTCTTG
TCAATCAGGCCACATGATCATCTCGAGTAG

Peptide Sequence

PEP ID

XP_016453507.1
PEP Infomation

PREDICTED: cyclic nucleotide-gated ion channel 2-like [Nicotiana tabacum]
Sequence

MSSRQDLRFFLSRWFGIFRRRSVQPDNSDDNDDDSNPISNSIECYACTQVGVPVFHSTSC
DGAHQPEWEASAGSSLVPIQNRTNNSRTGKSRSSRNRHQSGPFGRVLDPRSKRVQRWNRI
ILLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTCLDAVHLLHLWLQFRL
AYVSRESLVVGCGKLVWDARAIAAHYVRSVKGFWFDAFVVLPVPQVVFWLVVPKLIREEQ
IKLIMTILLLMFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAG
GCWYVLSIQRVASCLRQQCEQKASCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVMRK
PLCLDVNGPFPYGIYKWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIF
SICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSQLRQRVRHF
EHQRWAMMGGEDEMELVKDLPEGLRRDIKRFLCLDLIKKVPLFHSLDDLILDNICDRVKP
LVFSKDEKIIREGDPVHRVVFIVRGRVKSSQNLSKGMVATSILEPGGFFGDELLSWCLRR
PFIDRLPASSATFTCIESTEAFGLDANHLRFITDHFRYKFANERLKRTARYYSSNWRTWA
AVNIQLAWRRYMVRTSRPVNQVTENGDNDHRLRKYAAMFLSIRPHDHLE

Transcript Sequence

Gene sequence data has not been registered.